Journal: Biology

Article Title: Comparative Analysis and Structural Modeling of Elaeis oleifera FAD2, a Fatty Acid Desaturase Involved in Unsaturated Fatty Acid Composition of American Oil Palm

doi: 10.3390/biology11040529

Figure Lengend Snippet: Molecular docking of oleoyl glycerol as the ligand and the predicted structure of EoFAD2 from Elaeis olifera as the receptor ( A ) and the other studied oilseed species ( B ) performed using AutoDock Vina v1.2.

Article Snippet: Molecular protein docking of oleoyl glycerol as the ligand and the predicted structure of EoFAD2 from Elaeis oleifera as the receptor was performed using AutoDock Vina v1.2 [ ].

Techniques:

Journal: Scientific Reports

Article Title: A comprehensive evaluation of polygenic score and genotype imputation performances of human SNP arrays in diverse populations

doi: 10.1038/s41598-022-22215-y

Figure Lengend Snippet: Details of 23 human genotyping arrays used in this study.

Article Snippet: Infinium Omni5 v1.2 , Infinium_Omni5 , 4,327,108 , 4,245,106 , 4,131,134 , 106,418 , 2396 , 207.

Techniques: Genome Wide

Journal: Scientific Reports

Article Title: A comprehensive evaluation of polygenic score and genotype imputation performances of human SNP arrays in diverse populations

doi: 10.1038/s41598-022-22215-y

Figure Lengend Snippet: Mean and the standard deviation of imputation accuracy \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$r^2$$\end{document} r 2 measured in 22 autosomes at the MAF bin of (0.01–0.5].

Article Snippet: Infinium Omni5 v1.2 , Infinium_Omni5 , 4,327,108 , 4,245,106 , 4,131,134 , 106,418 , 2396 , 207.

Techniques: Standard Deviation

Journal: Scientific Reports

Article Title: A comprehensive evaluation of polygenic score and genotype imputation performances of human SNP arrays in diverse populations

doi: 10.1038/s41598-022-22215-y

Figure Lengend Snippet: Mean and standard deviation of imputation coverage (defined by the proportion of variants with \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$r^2 \ge 0.8$$\end{document} r 2 ≥ 0.8 over total number of variants in each chromosome) measured in 22 autosomes at the MAF bin of (0.01–0.5].

Article Snippet: Infinium Omni5 v1.2 , Infinium_Omni5 , 4,327,108 , 4,245,106 , 4,131,134 , 106,418 , 2396 , 207.

Techniques: Standard Deviation

Journal: JCO Precision Oncology

Article Title: Up-Front Multigene Panel Testing for Cancer Susceptibility in Patients With Newly Diagnosed Endometrial Cancer: A Multicenter Prospective Study

doi: 10.1200/PO.21.00249

Figure Lengend Snippet: Promega v1.2 MSI typing for tumors from patients with germline pathogenic PMS2 variants. Tumor 2006-EC is a representative MSI-high case with MLH1 methylation and absent MLH1 and PMS2. Fragment sizes not evident in matched normal DNA are seen with five mononucleotide repeats. Tumor 2343-EC ( PMS2 p.Pro246Cysfs*3) is microsatellite-stable. Aberrant fragment sizes are marked with red brackets. EC, endometrial cancer; MSI, microsatellite instability; N, normal DNA; T, tumor DNA.

Article Snippet: In addition, for a subset of cases with equivocal findings, tumor IHC was repeated (interpretation by A.S.) and/or microsatellite instability typing was performed using the Promega v1.2 panel.

Techniques: Methylation